species:   Drmel
pid:       MI0005837
parent:    dme-mir-980
paralog:   
locus:     NC_004354.4:280172-280269
matures:   ['UAGCUGCCUUGUGAAGGGCUUA', 'AGUUUUUCAUUUGGCCUGGCUAGC']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NC_004354.4:280172-280269

0 out of bounds
273 alignments
273 proper strand
270 stranded perfect matches

             **************************                   ************************                
AGUUGAUUGUAUGUCAGUUUUUCAUUUGGCCUGGCUAGCUUACUCCUUUUUAAAUAUUGCUAGCUGCCUUGUGAAGGGCUUACGUGUAAUUGCAGUUC
....((((((((((.((((((((((..(((..(((((((...................))))))))))..)))))))))).)))))))))).......
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCUUA---------------- l=22 a=9 c
---------------AGUUUUUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=24 a=167 c*
---------------AGUUUUUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=24 a=167 ma
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCUUA---------------- l=22 a=9 ma*

-------------------------------------------------------------AGCUGCCUUGUGAAGGGCUU----------------- l=20 a=1 
------------------------------------------------------------UAGCUGCCUUGUGAAGGGC------------------- l=19 a=1 
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCU------------------ l=20 a=3 
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCUU----------------- l=21 a=47 
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCUUA---------------- l=22 a=9 (c,ma*)
------------------------------------------------------------UAGCUGCCUUGUGAAGGGCUUu---------------- l=22 a=2 
--------------------UUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=19 a=1 
------------------UUUUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=21 a=1 
-----------------UUUUUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=22 a=1 
---------------AGUUUUUCAUUUGGCCUGG---------------------------------------------------------------- l=19 a=1 
---------------AGUUUUUCAUUUGGCCUGGC--------------------------------------------------------------- l=20 a=1 
---------------AGUUUUUCAUUUGGCCUGGCU-------------------------------------------------------------- l=21 a=9 
---------------AGUUUUUCAUUUGGCCUGGCUA------------------------------------------------------------- l=22 a=5 
---------------AGUUUUUCAUUUGGCCUGGCUAG------------------------------------------------------------ l=23 a=23 
---------------AGUUUUUCAUUUGGCCUGGCUAGC----------------------------------------------------------- l=24 a=167 (c*,ma)
---------------AGUUUUUCAUUUGGCuUGGCUAGC----------------------------------------------------------- l=24 a=1 

mb-01111
ax-1111111
ku-01
ss-111111111111
fn-111
